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Publications

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Conference Paper
H. Evans, Dickman, P., and Atkinson, M., The GRUMPS Architecture: Run-time Evolution in a Large Scale Distributed System, in Proceedings of the Workshop on Engineering Complex Object-Oriented Solutions for Evolution (ECOOSE), held as part of OOPSLA 2001., 2001.
I. Juhos, Tóth, A., and van Hemert, J. I., Heuristic Colour Assignment Strategies for Merge Models in Graph Colouring, in Springer Lecture Notes on Computer Science, 2005, p. 132--143.
I. Juhos and van Hemert, J. I., Improving Graph Colouring Algorithms and Heuristics Using a Novel Representation, in Springer Lecture Notes on Computer Science, 2006, p. 123--134.
D. Robertson, Walton, C., Barker, A., Besana, P., Chen-Burger, Y., Hassan, F., Lambert, D., Li, G., McGinnis, J., Osman, N., Bundy, A., McNeill, F., van Harmelen, F., Sierra, C., and Giunchiglia, F., Interaction as a Grounding for Peer to Peer Knowledge Sharing, in Advances in Web Semantics, 2007, vol. 1.
K. Karasavvas, Antonioletti, M., Atkinson, M., Hong, N. C., Sugden, T., Hume, A., Jackson, M., Krause, A., and Palansuriya, C., Introduction to OGSA-DAI Services, in Scientific Applications of Grid Computing, 2005, vol. 3458, p. 1--12.
M. P. Atkinson and Jordan, M. J., Issues Raised by Three Years of Developing PJama: An Orthogonally Persistent Platform for Java, in ICDT, 1999, pp. 1-30.
S. Aitken and Chen, Y., Managing the transition from OBO to OWL: The COBrA-CT Bio-Ontology Tools, in UK e-Science Al l Hands Meeting 2007, Nottingham, UK, 2007.
K. Karasavvas, Baldock, R., and Burger, A., Managing Transparency in Distributed Bioinformatics Systems, in European Media Lab Workshop on Management and Integration of Biochemical Data, 2000.
J. I. van Hemert and Baldock, R. A., Matching Spatial Regions with Combinations of Interacting Gene Expression Patterns, in Communications in Computer and Information Science, 2008, p. 347--361.
Z. cen, Gao, C., S, C., and Han, L., Measurement and analysis of IP network traffic, in In Proceedings of the 3th International Asia-Pacific Web Conference, xi'an China , 2000, p. 46~50.
J. I. van Hemert and Bäck, T., Measuring the Searched Space to Guide Efficiency: The Principle and Evidence on Constraint Satisfaction, in Springer Lecture Notes on Computer Science, 2002, p. 23--32.
J. I. van Hemert and Baldock, R. A., Mining spatial gene expression data for association rules, in Lecture Notes in Bioinformatics, 2007, p. 66--76.
L. De Ferrari, Aitken, S., van Hemert, J., and Goryanin, I., A model of social collaboration in Molecular Biology knowledge bases, in Proceedings of the 6th Conference of the European Social Simulation Association (ESSA'09), 2009.
J. I. van Hemert and Eiben, A. E., Mondriaan Art by Evolution, in Proceedings of the Eleventh Belgium/Netherlands Conference on Artificial Intelligence (BNAIC'99), 1999, p. 291--292.
S. Gesing, Herres-Pawlis, S., Birkenheuer, G., Brinkmann, A., Grunzke, R., Kacsuk, P., Kohlbacher, O., Kozlovszky, M., Krüger, J., Müller-Pfefferkorn, R., Schäfer, P., and Steinke, T., The MoSGrid Community - From National to International Scale, in EGI Community Forum 2012, 2012.
M. Wewior, Packschies, L., Blunk, D., Wickeroth, D., Warzecha, K., Herres-Pawlis, S., Gesing, S., Breuers, S., Krüger, J., Birkenheuer, G., and Lang, U., The MoSGrid Gaussian Portlet – Technologies for the Implementation of Portlets for Molecular Simulations, in Proceedings of the International Workshop on Science Gateways (IWSG10), 2010.
G. Birkenheuer, Blunk, D., Breuers, S., Brinkmann, A., Fels, G., Gesing, S., Grunzke, R., Herres-Pawlis, S., Kohlbacher, O., Krüger, J., Packschies, L., Schäfer, P., Schuller, B., Schuster, J., Steinke, T., Fabri, A. Szikszay, Wewior, M., Müller-Pfefferkorn, R., and Kohlbacher, O., MoSGrid: Progress of Workflow driven Chemical Simulations, in Grid Workflow Workshop 2011, 2012.
Y. Tanimura, Filgueira, R., Kojima, I., and Atkinson, M. P., MPI collective I/O based on advanced reservations to obtain performance guarantees from shared storage systems, in CLUSTER, 2013.
K. Karasavvas, Burger, A., and Baldock, R., A Multi-Agent Bioinformatics Integration System with Adjustable Autonomy: An Overview, in Proceedings of the First International Conference on Autonomous Agents and Multi-Agent Systems, 2002, p. 302--303.
K. Karasavvas, Burger, A., and Baldock, R., A Multi-Agent Bioinformatics Integration System with Adjustable Autonomy, in Lecture Notes in Computer Science, 2002, vol. 2417, p. 492--501.
M. Gruber, van Hemert, J. I., and Raidl, G. R., Neighborhood Searches for the Bounded Diameter Minimum Spanning Tree Problem Embedded in a VNS, EA, and ACO, in Proceedings of the Genetic and Evolutionary Computation Conference (GECCO 2006), Seattle, USA, 2006, vol. 2, p. 1187--1194.
M. Atkinson, Karasavvas, K., Antonioletti, M., Baxter, R., Borley, A., Hong, N. C., Hume, A., Jackson, M., Krause, A., Laws, S., Paton, N., Schopf, J., Sugden, T., Tourlas, K., and Watson, P., A New Architecture for OGSA-DAI, in UK e-Science All Hands Meeting, 2005.
C. Gao and Han, L., A new multifractal traffic model based on the wavelet transform, in ISCA 14th International Conference on Parallel and Distributed Computing systems, Texas, USA, 2001, pp. 157-162.
I. Juhos, Tóth, A., Tezuka, M., Tann, P., and van Hemert, J. I., A new permutation model for solving the graph k-coloring problem, in Kalmàr Workshop on Logic and Computer Science, 2003, p. 189--199.
L. Han and Hemert, J., A novel visual discriminator on network traffic pattern, in The Second International Conference on Advanced Engineering Computing and Applications in Sciences (ADVCOMP 2008), Valencia, Spain, 2008, pp. 141-146.

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