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Publications

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2001
H. Evans, Dickman, P., and Atkinson, M., “The GRUMPS Architecture: Run-time Evolution in a Large Scale Distributed System”, in Proceedings of the Workshop on Engineering Complex Object-Oriented Solutions for Evolution (ECOOSE), held as part of OOPSLA 2001., 2001.
2003
A. Anjomshoaa, Antonioletti, M., Atkinson, M., Baxter, R., Borley, A., Hong, N. C. P., Collins, B., Hardman, N., Hicken, G., Hume, A., Knox, A., Jackson, M., Krause, A., Laws, S., Magowan, J., Palansuriya, C., and Paton, N. W., “The Design and Implementation of Grid Database Services in OGSA-DAI”, in All Hands Meeting 2003, Nottingham, UK, 2003.
2004
R. Sinnott, Atkinson, M., Bayer, M., Berry, D., Dominiczak, A., Ferrier, M., Gilbert, D., Hanlon, N., Houghton, D., Hunt, E., and White, D., “Grid Services Supporting the Usage of Secure Federated, Distributed Biomedical Data”, All Hands Meeting 2004. Nottingham, UK, 2004.
M. Antonioletti, Atkinson, M., Baxter, R., Borley, A., Hong, N. C. P., Collins, B., Davies, J., Fitzgerald, D., Hardman, N., Hume, A. C., Jackson, M., Krause, A., Laws, S., Paton, N. W., Sugden, T., Watson, P., and Mar, “OGSA-DAI Status Report and Future Directions”, in All Hands Meeting 2004, Nottingham, UK, 2004.
M. Antonioletti, Atkinson, M., Baxter, R., Borley, A., Hong, N. C., Collins, B., Davies, J., Hardman, N., Hicken, G., Hume, A., Jackson, M., Krause, A., Laws, S., Magowan, J., Nowell, J., Paton, N. W., Pearson, D., and To, “OGSA-DAI: Two Years On”, in GGF10, Berlin, Germany, 2004.
M. Atkinson, Roure, D. D., Dunlop, A., Fox, G., Henderson, P., Hey, T., Paton, N., Newhouse, S., Parastatidis, S., Trefethen, A., Watson, P., and Webber, J., “Web Service Grids: An Evolutionary Approach”, 2004.
2005
M. Antonioletti, Atkinson, M., Baxter, R., Borle, A., Hong, N. C. P., Dantressangle, P., Hume, A. C., Jackson, M., Krause, A., Laws, S., Parsons, M., Paton, N. W., Schopf, J. M., Sugden, T., and Watson, P., “OGSA-DAI Status and Benchmarks”, in All Hands Meeting 2005, Nottingham, UK, 2005.
2008
B. Low, Cassidy, K., Fergusson, D., Atkinson, M., Meer, E. V., and McGeever, M., “Distributed Computing Education, Part 5: Coming to Terms with Intellectual Property Rights”, Distributed Systems Online, vol. 9, no. 12, p. 6, 2008.
2009
P. Brezany, Janciak, I., Woehrer, A., Aranda, C. B., Atkinson, M., and van Hemert, J., “ADMIRE D1.5 – Report defining an iteration of the model and language: PM3 and DL3”, ADMIRE project, 2009.
M. Atkinson, “Guest Editorial: Research Data: It’s What You Do With Them”, International Journal of Digital Curation, vol. 4, no. 1, 2009.
M. Atkinson, Meer, E. V., Fergusson, D., Davenhall, C., and Mehammed, H., “Strategies and Policies to Support and Advance Education in e-Science”, Computing Now, 2009.
2010
M. Atkinson, Roure, D. D., van Hemert, J., Jha, S., McNally, R., Mann, R., Viglas, S., and Williams, C., “Data-Intensive Research Workshop (15-19 March 2010) Report”, Data-Intensive Research Group, School of Informatics, University of Edinburgh, Edinburgh, 2010.
G. Yaikhom, Liew, C., Han, L., van Hemert, J., Atkinson, M., and Krause, A., “Federated Enactment of Workflow Patterns”, Lecture Notes in Computer Science, vol. 6271. Springer Berlin / Heidelberg, pp. 317-328, 2010.
2011
P. Martin, Atkinson, M., Parsons, M., Carter, A., and Francis, G., “EDIM1 Progress Report”, 2011.
L. Han, Liew, C. S., van Hemert, J., and Atkinson, M., “A Generic Parallel Processing Model for Facilitating Data Mining and Integration”, Parallel Computing, vol. 37, no. 3, pp. 157 - 171, 2011.
G. McGilvary, Atkinson, M., Barker, A., and Lloyd, A., “Optimum Platform Selection and Configuration for Computational Jobs”, in All Hands Meeting 2011, York, 2011.
F. Zhu, Rodríguez, D., Carpenter, T., Atkinson, M., and Wardlaw, J., “A Parallel Deconvolution Algorithm in Perfusion Imaging”, in Healthcare Informatics, Imaging, and Systems Biology (HISB), San Jose, California , 2011.
G. Yaikhom, Atkinson, M., van Hemert, J., Corcho, O., and Krause, A., “Validation and mismatch repair of workflows through typed data streams”, Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, vol. 369, no. 1949, pp. 3285-3299, 2011.
2012
R. Filgueira, Nuñez, A., Fernandez, J., and Atkinson, M., “An adaptive, scalable, and portable technique for speeding up MPI-based applications”, in International European Conference on Parallel and Distributed Computing, Europar-2012, 2012.
F. Zhu, Carpenter, T., Rodríguez, D., Atkinson, M., and Wardlaw, J., “Computed Tomography Perfusion Imaging Denoising Using Gaussian Process Regression”, Physics in Medicine and Biology, 2012.
F. Zhu, Rodríguez, D., Carpenter, T., Atkinson, M., and Wardlaw, J., “Parallel perfusion imaging processing using GPGPU”, Computer Methods and Programs in Biomedicine, p. -, 2012.
2013
O. Corcho and van Hemert, J., “Data-Intensive Analysis”, in THE DATA BONANZA: Improving Knowledge Discovery for Science, Engineering and Business, M. Atkinson, Baxter, R., Brezany, P., Corcho, O., Galea, M., Parsons, M., Snelling, D., and van Hemert, J., Eds. John Wiley & Sons Ltd., 2013, pp. 127-145.
O. Corcho, “Data-Intensive Components and Usage Patterns”, in THE DATA BONANZA: Improving Knowledge Discovery for Science, Engineering and Business, M. Atkinson, Baxter, R., Brezany, P., Corcho, O., Galea, M., Parsons, M., Snelling, D., and van Hemert, J., Eds. John Wiley & Sons Ltd., 2013, pp. 165-179.
M. Atkinson, “The Data-Intensive Survival Guide”, in THE DATA BONANZA: Improving Knowledge Discovery for Science, Engineering and Business, M. Atkinson, Baxter, R., Brezany, P., Corcho, O., Galea, M., Parsons, M., Snelling, D., and van Hemert, J., Eds. John Wiley & Sons Ltd., 2013, pp. 37-60.
M. Atkinson, “The Data-Intensive Survival Guide”, in THE DATA BONANZA: Improving Knowledge Discovery for Science, Engineering and Business, M. Atkinson, Baxter, R., Brezany, P., Corcho, O., Galea, M., Parsons, M., Snelling, D., and van Hemert, J., Eds. John Wiley & Sons Ltd., 2013, pp. 37-60.

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