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Publications

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2013
M. P. Atkinson, Baxter, R. M., Brezany, P., Corcho, O., Galea, M., Parsons, M., Snelling, D., and van Hemert, J., The DATA Bonanza: Improving Knowledge Discovery in Science, Engineering, and Business. John Wiley & Sons Inc., 2013, p. 580.
O. Corcho and van Hemert, J., “Data-Intensive Analysis”, in THE DATA BONANZA: Improving Knowledge Discovery for Science, Engineering and Business, M. Atkinson, Baxter, R., Brezany, P., Corcho, O., Galea, M., Parsons, M., Snelling, D., and van Hemert, J., Eds. John Wiley & Sons Ltd., 2013, pp. 127-145.
O. Corcho and van Hemert, J., “Data-Intensive Analysis”, in THE DATA BONANZA: Improving Knowledge Discovery for Science, Engineering and Business, M. Atkinson, Baxter, R., Brezany, P., Corcho, O., Galea, M., Parsons, M., Snelling, D., and van Hemert, J., Eds. John Wiley & Sons Ltd., 2013, pp. 127-145.
O. Corcho, “Data-Intensive Components and Usage Patterns”, in THE DATA BONANZA: Improving Knowledge Discovery for Science, Engineering and Business, M. Atkinson, Baxter, R., Brezany, P., Corcho, O., Galea, M., Parsons, M., Snelling, D., and van Hemert, J., Eds. John Wiley & Sons Ltd., 2013, pp. 165-179.
M. Atkinson, “The Data-Intensive Survival Guide”, in THE DATA BONANZA: Improving Knowledge Discovery for Science, Engineering and Business, M. Atkinson, Baxter, R., Brezany, P., Corcho, O., Galea, M., Parsons, M., Snelling, D., and van Hemert, J., Eds. John Wiley & Sons Ltd., 2013, pp. 37-60.
M. Atkinson, “Data-Intensive Thinking with DISPEL”, in THE DATA BONANZA: Improving Knowledge Discovery for Science, Engineering and Business, M. Atkinson, Baxter, R., Brezany, P., Corcho, O., Galea, M., Parsons, M., Snelling, D., and van Hemert, J., Eds. John Wiley & Sons Inc., 2013, pp. 61-122.
P. Martin and Yaikhom, G., “Definition of the DISPEL Language”, in THE DATA BONANZA: Improving Knowledge Discovery for Science, Engineering and Business, M. Atkinson, Baxter, R., Brezany, P., Corcho, O., Galea, M., Parsons, M., Snelling, D., and van Hemert, J., Eds. John Wiley & Sons Inc., 2013, pp. 203-236.
M. Atkinson and Parsons, M., “The Digital-Data Challenge”, in THE DATA BONANZA: Improving Knowledge Discovery for Science, Engineering and Business, M. Atkinson, Baxter, R., Brezany, P., Corcho, O., Galea, M., Parsons, M., Snelling, D., and van Hemert, J., Eds. John Wiley & Sons Ltd., 2013, pp. 5-13.
M. Atkinson, “The Digital-Data Revolution”, in THE DATA BONANZA: Improving Knowledge Discovery for Science, Engineering and Business, M. Atkinson, Baxter, R., Brezany, P., Corcho, O., Galea, M., Parsons, M., Snelling, D., and van Hemert, J., Eds. John Wiley & Sons Ltd., 2013, pp. 15-36.
A. Mouat and Snelling, D., “DISPEL Development”, in THE DATA BONANZA: Improving Knowledge Discovery for Science, Engineering and Business, M. Atkinson, Baxter, R., Brezany, P., Corcho, O., Galea, M., Parsons, M., Snelling, D., and van Hemert, J., Eds. John Wiley & Sons Inc., 2013, pp. 237-249.
C. S. Liew, Krause, A., and Snelling, D., “DISPEL Enactment”, in THE DATA BONANZA: Improving Knowledge Discovery for Science, Engineering and Business, M. Atkinson, Baxter, R., Brezany, P., Corcho, O., Galea, M., Parsons, M., Snelling, D., and van Hemert, J., Eds. John Wiley & Sons Inc., 2013, pp. 251-273.
T. Hey, “Foreword”, in THE DATA BONANZA: Improving Knowledge Discovery for Science, Engineering and Business, M. Atkinson, Baxter, R., Brezany, P., Corcho, O., Galea, M., Parsons, M., Snelling, D., and van Hemert, J., Eds. John Wiley & Sons Ltd., 2013, p. xvii-xviii.
D. Snelling, “Platforms for Data-Intensive Analysis”, in THE DATA BONANZA: Improving Knowledge Discovery for Science, Engineering and Business, M. Atkinson, Baxter, R. M., Brezany, P., Corcho, O., Galea, M., Parsons, M., Snelling, D., and van Hemert, J., Eds. John Wiley & Sons Ltd., 2013, pp. 197-201.
M. Atkinson, “Preface”, in THE DATA BONANZA: Improving Knowledge Discovery for Science, Engineering and Business, M. Atkinson, Baxter, R., Brezany, P., Corcho, O., Galea, M., Parsons, M., Snelling, D., and van Hemert, J., Eds. John Wiley & Sons Ltd., 2013, p. xix-xxviii.
O. Corcho and van Hemert, J., “Problem Solving in Data-Intensive Knowledge Discovery”, in THE DATA BONANZA: Improving Knowledge Discovery for Science, Engineering and Business, M. Atkinson, Baxter, R., Brezany, P., Corcho, O., Galea, M., Parsons, M., Snelling, D., and van Hemert, J., Eds. John Wiley & Sons Ltd., 2013, pp. 147-163.
O. Corcho and van Hemert, J., “Problem Solving in Data-Intensive Knowledge Discovery”, in THE DATA BONANZA: Improving Knowledge Discovery for Science, Engineering and Business, M. Atkinson, Baxter, R., Brezany, P., Corcho, O., Galea, M., Parsons, M., Snelling, D., and van Hemert, J., Eds. John Wiley & Sons Ltd., 2013, pp. 147-163.
O. Corcho, “Sharing and Reuse in Knowledge Discovery”, in THE DATA BONANZA: Improving Knowledge Discovery for Science, Engineering and Business, M. Atkinson, Baxter, R., Brezany, P., Corcho, O., Galea, M., Parsons, M., Snelling, D., and van Hemert, J., Eds. John Wiley & Sons Ltd., 2013, pp. 181-192.
2012
L. De Ferrari, Aitken, S., van Hemert, J., and Goryanin, I., “EnzML: multi-label prediction of enzyme classes using InterPro signatures.”, BMC Bioinformatics, vol. 13, p. 61, 2012.
2011
L. Han, van Hemert, J., and Baldock, R., “Automatically Identifying and Annotating Mouse Embryo Gene Expression Patterns”, Bioinformatics, vol. 27, pp. 1101–1107, 2011.
L. Han, Liew, C. S., van Hemert, J., and Atkinson, M., “A Generic Parallel Processing Model for Facilitating Data Mining and Integration”, Parallel Computing, vol. 37, no. 3, pp. 157 - 171, 2011.
K. D'Mellow, Rodríguez, D., Carpenter, T., Koetsier, J., Job, D., van Hemert, J., Wardlaw, J., and Zhu, F., “RapidBrain: Developing a Portal for Brain Research Imaging”, in All Hands Meeting 2011, York , York, 2011.
G. Yaikhom, Atkinson, M., van Hemert, J., Corcho, O., and Krause, A., “Validation and mismatch repair of workflows through typed data streams”, Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, vol. 369, no. 1949, pp. 3285-3299, 2011.
2010
M. Atkinson, Roure, D. D., van Hemert, J., Jha, S., McNally, R., Mann, R., Viglas, S., and Williams, C., “Data-Intensive Research Workshop (15-19 March 2010) Report”, Data-Intensive Research Group, School of Informatics, University of Edinburgh, Edinburgh, 2010.
G. Yaikhom, Liew, C., Han, L., van Hemert, J., Atkinson, M., and Krause, A., “Federated Enactment of Workflow Patterns”, Lecture Notes in Computer Science, vol. 6271. Springer Berlin / Heidelberg, pp. 317-328, 2010.
S. Gesing, van Hemert, J., Koetsier, J., Bertsch, A., and Kohlbacher, O., “TOPP goes Rapid”, in Cluster Computing and the Grid, IEEE International Symposium on, Los Alamitos, CA, USA, 2010, p. 598--599.

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