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Publications

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A. Barker, Weissman, J., and van Hemert, J. I., The Circulate Architecture: Avoiding Workflow Bottlenecks Caused By Centralised Orchestration, Cluster Computing, vol. 12, p. 221--235, 2009.
J. Vilaplana, Solsona, F., Abella, F., Filgueira, R., and Torrento, J. Rius, The Cloud Paradigm Applied to e-Health, BMC Med. Inf. {&} Decision Making, vol. 13, p. 35, 2013.
S. Aitken and Chen, Y., COBrA and COBrA-CT: Ontology Engineering Tools, in Anatomy Ontologies for Bioinformatics: Principles and Practice, A. Burger, Davidson, D., and Baldock, R., Eds. Springer, 2007.
J. I. van Hemert, Comparing Classical Methods for Solving Binary Constraint Satisfaction Problems with State of the Art Evolutionary Computation, in Springer Lecture Notes on Computer Science, 2002, p. 81--90.
M. Cuggia, Besana, P., and Glasspool., D., Comparing Clinical Decision Support Systems for Recruitment in Clinical Trials, Journal of Medical Informatics, 2010.
B. G. W. Craenen, Eiben, A. E., and van Hemert, J. I., Comparing Evolutionary Algorithms on Binary Constraint Satisfaction Problems, IEEE Transactions on Evolutionary Computation, vol. 7, p. 424--444, 2003.
J. Eggermont, Eiben, A. E., and van Hemert, J. I., Comparing genetic programming variants for data classification, in Proceedings of the Eleventh Belgium/Netherlands Conference on Artificial Intelligence (BNAIC'99), 1999, p. 253--254.
J. Eggermont, Eiben, A. E., and van Hemert, J. I., A comparison of genetic programming variants for data classification, in Springer Lecture Notes on Computer Science, 1999, p. 281--290.
R. Filgueira, Singh, D. E., Calderón, A., and Carretero, J., CoMPI: Enhancing MPI Based Applications Performance and Scalability Using Run-Time Compression., in EUROPVM/MPI 2009.Espoo, Finland. September 2009, Espoo. Finland, 2009, vol. 5759/2009.
A. Defaweux, Lenaerts, T., van Hemert, J. I., and Parent, J., Complexity Transitions in Evolutionary Algorithms: Evaluating the impact of the initial population, in Proceedings of the Congress on Evolutionary Computation, 2005, p. 196--203.
F. Zhu, Carpenter, T., Rodríguez, D., Atkinson, M., and Wardlaw, J., Computed Tomography Perfusion Imaging Denoising Using Gaussian Process Regression, Physics in Medicine and Biology, 2012.
M. Atkinson, Crowcroft, J., Goble, C., Gurd, J., Rodden, T., Shadbolt, N., Sloman, M., Sommerville, I., and Storey, T., Computer Challenges to emerge from e-Science. , 2003.
L. Bravo, Cheney, J., Fundulaki, I., and Segovia, R., Consistency and repair for XML write-access control policies, VLDB J., vol. 21, pp. 843-867, 2012.
J. I. van Hemert, Constraint Satisfaction Problems and Evolutionary Algorithms: A Reality Check, in Proceedings of the Twelfth Belgium/Netherlands Conference on Artificial Intelligence (BNAIC'00), 2000, p. 267--274.
I. Juhos and van Hemert, J. I., Contraction-Based Heuristics to Improve the Efficiency of Algorithms Solving the Graph Colouring Problem, in Studies in Computational Intelligence, C. Cotta and van Hemert, J. I., Eds. Springer, 2008, p. 167--184.
U. A. Acar, Ahmed, A., Cheney, J., and Perera, R., A Core Calculus for Provenance, in POST, 2012.
R. R. Kitchen, Sabine, V. S., Sims, A. H., Macaskill, E. J., Renshaw, L., Thomas, J. S., van Hemert, J. I., Dixon, J. M., and Bartlett, J. M. S., Correcting for intra-experiment variation in Illumina BeadChip data is necessary to generate robust gene-expression profiles, BMC Genomics, vol. 11, no. 134, 2010.
K. Karasavvas, Baldock, R., and Burger, A., A Criticality-Based Framework for Task Composition in Multi-Agent Bioinformatics Integration Systems, Bioinformatics, vol. 21, p. 3155--3163, 2005.
K. Karasavvas, Baldock, R., and Burger, A., Criticality-Based Task Composition in Distributed Bioinformatics Systems, in Proceedings of the Twelfth International Conference on Intelligent Systems for Molecular Biology, 2002.
P. V. Coveney and Atkinson, M. P., Crossing boundaries: computational science, e-Science and global e-Infrastructure II, All Hands Meeting 2008, vol. 367. Royal Society Publishing, Edinburgh, pp. 2619-2806, 2009.
P. V. Coveney and Atkinson, M. P., Crossing boundaries: computational science, e-Science and global e-Infrastructure I, All Hands meeting 2008, vol. 367. Royal Society Publishing, Edinburgh, pp. 2423-2617, 2009.
I. Dedinski, De Meer, H., Han, L., Mathy, L., Pezaros, D., P., Sventek, J. S., and Xiaoying, Z., Cross-Layer Peer-to-Peer Traffic Identification and Optimization Based on Active Networking, in 7th International Working Conference on Active and Programmable Networks, Sophia Antipolis, French Riviera, La Cote d'Azur, France, November 21-23, 2005., 2005.

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