Peer-to-Peer Experimentation in Protein Analysis: an Architecture, Experiment and Initial Results

Xueping Quan, Chris Walton, Dietlind Gerloff, Joanna Sharman, and Dave Robertson

The result sequences from our CYSP experiment are listed in the table below.
A summary of these results is also available for download

Q0045ASN10-ILE471
Q0065ARG4-SER52
Q0115GLN22-PRO174
Q0120SER15-GLN253
Q0275HIS9-GLY268
YAL005CTHR11-GLY335GLY404-PRO462
YAL016WASN33-LEU626
YAL029CASN222-ALA766
YAL062WGLU6-VAL393
YAR007CILE184-GLY418
YAR073WARG34-GLN372
YAR075WLYS5-LEU155
YBL021CTRP41-GLN126
YBL030CASN22-LEU308
YBL036CGLY4-GLY246
YBL039CTYR3-ALA557
YBL052CILE275-ASP480
YBL057CGLU93-TYR214
YBL063WASN52-SER409
YBL064CALA55-PRO234
YBL075CALA4-GLY380LEU392-ARG533
YBL078CMET1-GLY116
YBL091CPRO5-ALA93LEU61-TYR421PRO5-TYR95
YBL091C-APRO5-ALA93
YBL099WASN61-PHE545
YBR014CPRO99-GLU173ALA87-GLU173ALA88-LYS186
YBR024WPRO124-GLY263
YBR025CLYS22-PHE387
YBR028CGLU197-TRP407
YBR034CTYR30-HIS348
YBR039WTHR35-ILE304
YBR066CHIS153-HIS205
YBR080CVAL558-MET691
YBR085WGLN8-LEU297
YBR087WTRP4-SER252
YBR089C-AARG30-LYS84
YBR117CPHE4-PHE681
YBR121CTHR229-LYS289
YBR139WLYS92-GLY494
YBR143CGLU6-GLN416
YBR145WALA12-GLU348
YBR146WALA156-ARG270
YBR160WALA6-GLU297
YBR196CVAL161-GLY461
YBR199WALA130-PRO418
YBR205WGLY83-ALA395
YBR218CVAL68-LEU432
YBR221CMET39-SER364
YBR227CGLU358-PRO443
YBR234CPRO21-TYR274
YBR251WLYS147-ALA290
YBR252WILE11-VAL121
YBR256CMET1-LYS199
YBR274WPHE26-TRP280
YCL017CILE100-LEU473
YCL024WVAL51-LYS286
YCL026C-AARG14-ALA77
YCL030CGLN371-GLU762
YCL064CLYS7-SER319
YCR005CGLY64-TYR444
YCR027CARG17-GLY134
YCR032WARG1528-LYS1839
YCR045CGLU160-SER380
YCR065WPRO110-LYS190
YCR069WTYR55-PRO214
YCR091WARG368-LEU617
YCR105WPRO4-ASP354
YDL007WTYR181-GLU406
YDL010WILE128-LEU209
YDL014WVAL87-ARG319
YDL017WILE29-ALA188
YDL029WILE7-SER383
YDL042CARG255-GLU382
YDL047WLYS15-PHE287
YDL064WCYS5-GLN154
YDL066WVAL26-GLN421
YDL080CSER18-GLN565
YDL084WGLY63-PHE269
YDL093WGLY338-GLY451
YDL095WGLY343-ALA453
YDL100CTRP20-GLY198
YDL103CTHR2-ASP443
YDL108WVAL13-PHE290
YDL120WASP101-GLU167
YDL126CLEU37-ASN207
YDL134CLYS79-GLU340
YDL159WASP190-HIS463
YDL161WSER18-ASP135
YDL164CILE146-GLN750
YDL166CPRO8-HIS175
YDL168WILE10-LYS381
YDL188CLYS87-GLU348
YDL190CGLU873-PHE947
YDL200CGLY116-ASN199
YDL219WMET1-ASP147
YDL229WARG429-SER502
YDR002WLYS77-GLU196
YDR009WLEU24-CYS516
YDR035WARG18-ARG365
YDR037WARG258-LEU571
YDR043CARG172-HIS226
YDR047WPRO5-ARG358
YDR058CTYR85-VAL183
YDR059CSER3-VAL148
YDR075WGLY14-GLU284
YDR091CALA81-LEU603
YDR096WLYS826-HIS875
YDR099WARG57-TYR183
YDR122WTHR191-TRP397
YDR129CASN138-LEU640
YDR139CMET1-LEU71
YDR145WMET415-ASN487
YDR148CVAL238-LEU462
YDR170CPRO842-LYS1011
YDR172WHIS485-ALA684
YDR212WSER21-VAL116
YDR226WARG8-LEU219
YDR232WTYR73-ASP481
YDR236CLEU132-GLN216
YDR248CVAL13-VAL184
YDR253CLYS96-HIS144
YDR280WARG24-VAL176
YDR286CLEU23-ILE83
YDR292CGLY393-MET455
YDR304CTHR33-GLU197
YDR337WTHR171-LEU236
YDR388WALA428-LEU479
YDR394WPRO167-LYS397
YDR424CILE10-THR91
YDR436WLEU405-PHE647
YDR441CALA14-LEU171
YDR453CVAL17-ILE128
YDR466WARG6-ASP300
YDR487CPRO4-LYS208
YDR490CGLU173-LEU380
YDR507CLYS52-LYS285
YDR519WARG30-VAL131
YDR523CPRO14-VAL272
YDR538WARG56-GLU237
YEL012WARG7-ALA147
YEL021WMET1-ASN267
YEL026WASN5-ILE126
YEL030WILE30-GLY404LEU412-ALA552
YEL034WLEU92-ALA146
YEL058WLEU473-VAL549
YEL060CPRO289-LEU535
YEL066WARG31-ASN177
YER003CSER23-THR380
YER016WARG9-ALA119
YER017CLYS284-HIS519
YER020WGLU123-THR441
YER025WASN96-LYS519
YER028CARG15-LYS71
YER031CLEU29-GLU168
YER040WCYS306-ARG353
YER048CGLU6-GLY71
YER061CARG3-PHE436
YER066WLEU69-SER148
YER073WLEU46-ALA448
YER081WMET59-TYR469
YER090WLYS241-GLY467
YER091CLEU165-TYR631
YER099CILE6-LEU312
YER103WTHR11-ALA371GLY405-PRO463
YER123WHIS13-LEU314
YER130CCYS394-HIS440
YER133WILE12-LYS296
YER146WLEU7-PRO83
YER169WLYS707-HIS756
YER170WARG16-PHE222
YER177WGLU41-LEU225
YER179WARG92-ASP331
YFL021WILE308-GLN358
YFL033CALA1155-PHE1269
YFL037WGLU3-GLN426
YFL045CLEU15-GLN239
YFL059WGLU26-HIS256
YFR014CILE89-TRP298
YFR028CGLN245-ARG317
YFR055WASN22-GLY340
YGL026CPHE306-VAL687ALA19-ASP244
YGL035CCYS43-THR91
YGL044CARG18-LYS90
YGL067WPRO219-PHE329
YGL073WPRO173-ASN258
YGL096WTHR205-ARG251
YGL105WSER207-LYS345
YGL136CLEU49-GLY102
YGL143CHIS148-MET397
YGL180WPRO205-ARG313
YGL194CPRO49-ILE347
YGL206CLEU4-LEU467
YGL210WLEU29-SER99
YGL216WPHE153-ALA435
YGL256WSER96-ALA462
YGR021WGLU45-ALA196
YGR029WPRO84-GLU189
YGR040WVAL16-ALA314
YGR043CSER14-MET333SER14-MET333SER14-MET333
YGR061CUNK402-PHE1182
YGR074WLYS2-GLN49
YGR087CVAL306-ALA428
YGR088WTYR26-LEU385
YGR124WALA6-THR519
YGR133WASP57-ILE158
YGR136WTYR57-PRO109
YGR144WSER46-ALA316
YGR152CTYR4-ARG167
YGR155WASN13-ASP331
YGR173WARG65-THR151
YGR185CVAL93-GLU314
YGR192CVAL28-SER281
YGR199WLYS410-GLN469
YGR207CARG8-PRO236
YGR209CVAL23-VAL88
YGR218WGLY829-ALA908
YGR256WVAL5-ASP450
YGR267CGLU54-LEU238
YGR270WVAL410-LEU670
YGR286CTRP53-MET367
YGR287CLYS13-TYR586LYS13-TYR586
YHL002WARG221-ILE274
YHL007CTYR620-GLU873
YHL019CARG261-ASN321
YHR005CASN250-GLU394LEU44-ASN110
YHR008CLYS27-GLY231
YHR012WMET1-ASN159
YHR016CPRO412-ARG466
YHR018CLEU20-LEU458
YHR030CILE26-ASP323
YHR046CSER40-ILE270
YHR051WGLU47-LEU143
YHR057CTHR35-GLU198
YHR068WLYS99-PHE376
YHR086WSER164-GLY238SER164-GLY227
YHR091CLYS113-MET643
YHR104WVAL5-TRP316
YHR111WALA60-GLY290
YHR128WGLN92-ILE163
YHR129CVAL15-VAL379
YHR135CHIS68-VAL317
YHR144CTYR166-VAL298
YHR148WARG109-ASP162
YHR168WGLY306-PHE472GLY306-PHE472
YHR174WTHR25-GLU417
YHR179WPRO35-GLU336
YHR183WALA3-ASN440
YHR190WCYS42-VAL316
YHR205WSER471-PRO686
YHR210CGLU9-VAL341
YIL008WVAL4-LEU96
YIL010WGLU62-LYS188
YIL033CSER285-LEU400
YIL034CASP3-ILE256
YIL044CLEU11-ALA95
YIL051CLEU21-VAL142
YIL083CLYS74-PRO218
YIL085CMET88-THR260
YIL094CILE26-LEU371
YIL106WGLN167-GLU228
YIL112WALA337-THR434
YIL118WILE15-ARG133
YIL131CPRO305-ILE379
YIL172CLYS13-TYR586
YIR001CARG64-VAL136
YIR026CGLN109-LYS169
YIR037WGLY14-LEU110
YJL034WLEU437-LYS578GLY50-LEU425
YJL045WASP44-TYR634
YJL052WVAL28-VAL322
YJL055WGLU123-ASP217
YJL056CCYS773-GLN847
YJL073WASP538-ARG601
YJL081CGLU378-GLY479
YJL089WALA45-THR100
YJL110CCYS131-ARG178
YJL121CILE6-GLU225
YJL124CALA45-GLU114
YJL128CASP358-LYS625
YJL139CARG90-GLU397
YJL155CVAL16-LYS424
YJL197WILE962-TYR1107
YJL216CLYS8-LEU580
YJR007WCYS6-ASN290
YJR009CASP61-SER281
YJR010WALA3-PHE511
YJR045CLEU414-ALA555GLN29-ALA555
YJR047CLYS68-ILE138
YJR058CVAL3-ASP147
YJR065CPHE95-ARG441
YJR068WTRP27-GLY278
YJR069CVAL7-LEU192
YJR096WLYS7-MET262
YJR121WLYS45-LEU391
YJR125CGLU31-ASP149
YJR153WLYS42-SER355
YKL001CTHR3-LEU192
YKL013CGLN3-ALA164
YKL020CSER699-GLY776MET705-GLY776
YKL035WLYS78-GLY492
YKL040CVAL153-PRO230
YKL049CLYS131-GLN227
YKL056CMET1-LYS166
YKL060CSER41-LYS326
YKL062WLYS571-HIS624
YKL067WGLU6-GLU153
YKL085WLYS19-ILE324
YKL091CLEU6-PRO300
YKL101WLYS169-LYS371
YKL104CLYS302-ILE650
YKL114CGLU60-ALA198
YKL127WILE5-THR570
YKL129CGLY37-THR555
YKL160WVAL16-GLU78
YKL181WHIS12-HIS193
YKL184WASN85-ILE461
YKL192CLYS66-ILE118
YKL194CVAL42-PHE454
YKL197CASN725-VAL925
YKL210WILE597-ALA859ASP427-PHE624
YKL216WLEU5-ILE314
YKL218CTYR19-ILE317
YKR001CGLU3-ALA344
YKR008WPRO212-ILE289
YKR009CPHE7-LEU240
YKR014CPHE4-LEU129
YKR017CVAL334-TYR387
YKR024CLYS165-LYS311
YKR034WCYS31-ASN79
YKR055WLYS74-LEU239
YKR061WASN88-ASN395
YKR068CILE25-ARG182
YKR097WTHR32-PHE548
YLL001WGLU5-THR341
YLL010CLEU246-ASP410
YLL013CVAL608-TYR849
YLL024CGLY404-PRO462THR11-GLY335GLY404-PRO462LEU388-GLU524
YLR009WPHE8-ALA54
YLR019WLEU216-ASN369
YLR028CLYS6-HIS591
YLR043CVAL21-VAL87
YLR058CASP7-LEU467
YLR086WPHE1271-LYS1399
YLR096WARG169-TYR381
YLR113WTHR20-TYR305
YLR116WLYS147-SER244
YLR134WILE70-ASN470
YLR146CGLN26-ILE298ASP12-ILE81
YLR147CVAL8-ASP76
YLR153CGLN38-ASP533
YLR155CILE35-LEU343
YLR163CGLY25-LEU460
YLR170CLEU4-GLU146
YLR172CLEU2-ALA268
YLR176CTRP288-LEU358
YLR206WSER18-ASP135
YLR209CPRO38-VAL265
YLR213CSER183-LEU283
YLR229CGLN2-LYS186
YLR244CPRO128-ARG374
YLR259CLYS25-GLU551
YLR264WALA10-ARG64
YLR268WARG9-TYR124
YLR275WGLY29-VAL109
YLR286CILE29-ASN296
YLR293CPRO11-GLY172
YLR303WALA72-ILE427
YLR304CLYS42-LYS778
YLR306WALA28-LEU157
YLR307WTHR113-TRP231
YLR308WTHR123-SER242
YLR323CPHE197-ASN255
YLR328WLYS163-ASP388
YLR354CLYS72-LYS331
YLR359WSER13-VAL387
YLR367WSER4-VAL62
YLR369WLEU428-GLN567
YLR370CALA3-LEU178
YLR377CCYS126-GLY304
YLR397CLEU242-VAL436GLY546-ALA735
YLR438WPRO27-ILE421
YLR449WTHR283-MET391
YLR450WVAL621-ASN1020
YML016CASN387-LEU644
YML021CGLU100-TRP334
YML028WVAL35-GLU118
YML032CILE54-PHE173
YML056CGLY36-GLU83
YML074CSER301-MET409
YML075CLYS617-ASN1024
YML078WLYS23-LEU182
YML087CLEU77-MET286
YML130CPHE56-LEU424
YMR009WMET1-ILE176
YMR037CARG630-HIS698
YMR039CILE40-ASP99
YMR042WGLN83-SER159
YMR056CGLN9-LEU299
YMR075WASP261-CYS306
YMR096WGLU28-ALA254
YMR120CVAL52-HIS592
YMR121CGLU8-ALA110
YMR127CLEU100-ILE302
YMR138WILE17-ARG115
YMR139WTHR42-LEU325
YMR161WPHE22-GLU75
YMR183CALA39-GLU223
YMR186WVAL364-TYR468
YMR189WALA552-GLU950
YMR216CPHE148-GLU303
YMR217WALA266-LYS436
YMR260CLYS11-ASP128
YMR267WPHE34-VAL310
YMR300CTHR13-GLU487
YMR301CLYS453-HIS656
YMR303CLEU34-VAL266
YMR323WSER2-ASP433
YNL009WLYS3-MET407
YNL027WLYS585-THR655
YNL032WVAL116-ASP263
YNL036WASN44-GLN210
YNL049CVAL68-ARG876
YNL056WILE4-ASN154ILE4-ASN154
YNL068CTYR345-GLU423
YNL075WARG87-PRO149
YNL081CTYR25-ARG112
YNL090WLYS9-LEU178LYS9-LEU178LYS9-LEU178
YNL093WTHR12-PRO180THR12-PRO180
YNL097CGLU279-LYS328
YNL098CVAL14-GLU161
YNL104CALA44-ILE411
YNL106CSER581-LYS893
YNL111CTYR5-VAL77
YNL137CLYS89-VAL152
YNL148CILE159-ILE231
YNL154CHIS75-TYR320
YNL161WLEU349-HIS501
YNL180CSER3-ILE218
YNL185CVAL10-ASN95
YNL209WLEU396-SER502
YNL241CLYS26-LEU427
YNL243WSER760-ASP895
YNL244CTHR22-PHE108
YNL290WLEU13-GLU332
YNL292WGLY69-LEU189
YNL298WARG565-PHE825
YNL307CILE41-LEU330
YNL312WLEU39-ASP104
YNL329CTHR730-MET951
YNL330CPRO42-TYR340
YNL333WGLU26-HIS256
YNR001CILE72-PHE463
YNR006WTRP170-LEU231
YNR012WPRO56-SER240
YNR032WALA13-GLU296
YNR035CPHE168-ARG299
YNR036CLYS45-PRO150
YNR037CTHR28-ARG80
YNR050CLYS3-ALA446
YOL004WLYS402-PRO472
YOL006CGLU130-LYS584LYS690-PHE769
YOL012CSER24-ILE119
YOL058WGLY4-LEU365
YOL061WASP236-HIS307ASN5-GLN99ILE394-PHE492
YOL080CILE122-LYS274
YOL094CGLN8-ILE316
YOL097CGLN25-VAL408
YOL113WARG402-SER640
YOL123WLYS160-ILE234
YOL140WLEU34-GLU419
YOL157CLYS13-TYR586
YOR003WPRO177-LEU423
YOR007CALA102-ILE199
YOR020CSER10-LYS105
YOR025WSER52-THR163
YOR034CGLY73-LEU171
YOR039WASP36-HIS208
YOR046CPHE94-GLU293
YOR061WGLY101-LEU314
YOR094WTHR31-LEU121
YOR099WGLY68-GLN389
YOR101WGLU10-ARG172
YOR117WTHR179-ASN405
YOR120WLEU14-LYS293
YOR140WPHE65-VAL127
YOR142WTYR24-LYS329
YOR167CALA10-GLU60
YOR180CARG4-MET231
YOR185CGLU10-GLY173
YOR187WLEU245-GLU437
YOR190WASN47-CYS444
YOR202WVAL52-SER205
YOR226CGLY52-ILE143
YOR236WGLU18-ALA160
YOR254CASP125-TYR195
YOR298C-AALA84-ARG137
YOR326WLEU695-MET772
YOR335CTHR10-SER459
YOR339CVAL9-LYS144
YOR358WPRO161-PRO236
YOR374WLEU47-ARG514
YOR388CTHR94-PHE353
YOR393WSER2-ASP433
YPL026CARG115-LEU207
YPL028WALA75-SER391
YPL031CLEU10-PHE297
YPL042CGLY338-GLU390
YPL061WSER58-GLU419
YPL063WGLY212-THR332
YPL091WTYR24-VAL480
YPL111WGLU14-ALA307
YPL119CILE153-GLY377
YPL132WGLU138-PHE253
YPL135WLYS54-ILE147
YPL140CGLY221-ILE481
YPL141CTYR98-PRO315
YPL170WPHE44-ILE145
YPL171CALA54-GLU390
YPL174CILE15-LYS71
YPL178WSER46-ASP122
YPL179WASN264-PHE530
YPL204WSER44-LYS274
YPL209CLEU99-ILE355
YPL211WMET1-ARG174
YPL239WTHR52-LYS148
YPL252CGLN72-ILE152
YPL266WHIS37-GLY241
YPR001WPHE75-LEU469
YPR002WASP38-LEU512
YPR006CCYS410-GLN555
YPR013CCYS256-HIS306
YPR015CCYS187-HIS237CYS187-HIS237
YPR024WVAL278-LYS515
YPR066WCYS3-ASN295
YPR068CTYR164-THR387
YPR069CTHR21-LEU292
YPR081CTHR172-LEU246GLU8-ASN93
YPR082CLEU6-ASP136
YPR088CILE36-SER300
YPR112CVAL767-TYR837
YPR145WALA6-THR520
YPR154WTYR58-PRO110
YPR161CTYR60-GLU368
YPR165WVAL84-TYR161
YPR176CLYS9-PHE319