Homepage for Edinburgh BioNLP Group

Meetings

The group will meet on Mondays, 2:30pm–3:30pm in the HCRC Seminar Room.
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Current Programme (Summer 2005)
June 6 Text-mining, milk proteins and nutraceutical potential - the MilkER project (Stephen: slides )
July 11 Report on BioLINK/ACL/CoNLL: Malvina/Sarah - slides, Bea - slides
July 18 Grounding Gene Mentions with Respect to Gene Database Identifiers - Ben Hachey: slides.
August 22 Douglas Armstrong: extracting protein-protein interaction pairs and experimentally filtering for the truly interacting
August 29 Sebastian Riedel: Participants' approaches to the LLL challenge
November 14 Stephen Edwards: BioText Workshop overview, MMTX demo, PhD update, slides, whatizit notes
Provisional: COGNIA text mining project overview
Sometime Mark Cumiskey
Previous Programme (Winter/Spring 2005)
Jan 24 BioNLP Resources (Gail) (tagger comparisons)
Jan 31 Introduction to Molecular Biology (Stephen) (tagged abstract)
Feb 7 Prelimary readings on Relation Extraction (Ewan: notes)
Mar 14 Mining External Resources for BioMedical IE (Malvina: slides)
May 2 Overview of First Semantic Mining in BioMedicine (SMBM) symposium: programme (Catherine: slides, Malvina: slides, Gail: slides)
May 9 Learning Language in Logic (LLL05) Challenge task: Extracting Relations from Bio-medical Texts (Sebastian: slides) Bloglines, BARF, RSS feeds and Google alerts (John: links)
May 30 Lexical Issues in Anatomical Ontologies within the XSPAN Project (Sarah: slides)

 

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Last edited November 22, 2005